NeMO Identifier: Collection

NeMO ID: nemo:col-bp5d0b2

  • Collection Name: Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from opossum brain (BICAN-2026-01-RR-SCO MetaSnapshot)
  • Short Name: lein_10XMultiome_opossum_nuclei (BICAN-2026-01-RR-SCO MetaSnapshot)
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: gray short-tailed opossum
  • Assays: multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: entorhinal cortex , primary visual cortex (striate cortex, area V1/17)
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: BICAN , Rapid Release , 2026
  • Contact:
  • Grant Numbers: UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol: Protocol
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
entorhinal cortex
primary visual cortex (striate cortex, area V1/17)

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-rgdb31h Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from opossum brain (MetaCumulative) collection lein_10XMultiome_opossum_nuclei (MetaCumulative)
nemo:col-ow59b0f BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-01-RR-SCO) collection BICAN-2026-01-RR-SCO

Child Collections

Collection ID Name Type Short Name Submission Status
nemo:col-5dw85yy Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from opossum brain (BICAN-2026-01-RR-SCO Snapshot ATAC) files lein_10XMultiome_opossum_nuclei (BICAN-2026-01-RR-SCO Snapshot ATAC)
nemo:col-7e9qkvy Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from opossum brain (BICAN-2026-01-RR-SCO Snapshot RNA) files lein_10XMultiome_opossum_nuclei (BICAN-2026-01-RR-SCO Snapshot RNA)

Documentation


Data Citation:

Dataset: Trygve Bakken, Darren Bertagnolli, Anish Bhaswanth Chakka, Rushil Chakrabarty, Nick Dee, Rebecca Ferrer, Aaron Garcia, Jeff Goldy, Junitta Guzman, Madeleine Hewitt, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Danielle L. Jones, Lauren Kruse, Boaz P. Levi, Brian Long, Delissa McMillen, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Jessie Puckett, Matthew Schmitz, Stephanie Seeman, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Jack Waters, Morgan Wirthlin, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from opossum brain [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-bp5d0b2