Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot)

Program
bican
Collection Type
Static
Specimen Type
nuclei
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from human brains were assayed using snm3C-seq. (BICAN-2026-01-RR-SCO Snapshot)

Data citation
Dataset: Matthew G Heffel, Heng Xu, Oier Pastor Alonso, Xinzhe Li, Runjia Li, Yi Zhang, Joonho Kum, Min-Jen Tsai, Zachary von Behren, Eleazar Eskin, Bogdan Pasaniuc, Jason Ernst, Bogdan Bintu, Quan Zhu, Eran Mukamel, Mercedes F Paredes, Chongyuan Luo (2026) Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-tqreqdu
Funding agency
NIMH
Grant numbers
U01MH130995
Access
open
License
No license listed

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-01-RR-SCO/col-tqreqdu__BICAN__Snapshot__2026-01-15__BICAN_Dev_Multiomics__ucla_luo__nuclei__m3C-seq__human__demultiplexed_fastq__open__no_restriction.tgz 7,520 files 22,744.45 GB
    Raw BDBag

Anatomical Regions

  • occipitotemporal (fusiform) gyrus, temporal part
  • dorsolateral prefrontal cortex
  • subiculum
  • hippocampal proper
  • inferior temporal gyrus
  • middle temporal gyrus

Taxa

human

Projects this collection belongs to

  • nemo:prj-vwtwc3r
    Spatiotemporal epigenomic and chromosomal architectural cell atlas of developing human brains

Assays, Modalities & Techniques

Assays
methylation
Modalities
epigenome
Techniques
m3c-seq

Child collections

No child collections listed for Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot) collection.

Parent collections

  • nemo:col-puakzh8
    Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (Cumulative)
    collection
  • nemo:col-ow59b0f
    BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-01-RR-SCO)
    collection
  • nemo:col-i17zvqh
    BICAN-2026-09-RR-SCO
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for Developmental Multiomics: Chromatin Conformation and Cytosine DNA methylation (mC) analysis of single nuclei from human brain (BICAN-2026-01-RR-SCO Snapshot) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources