Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain - fastq (BICAN-2026-09-RR-SCO MetaSnapshot)

Program
bican
Collection Type
Static
Keywords
Rapid Release 2026

As part of the BRAIN Initiative Cell Atlas Network, single nuclei from rhesus monkey were assayed using the 10X Genomics Multiome platform - fastq (BICAN-2026-09-RR-SCO MetaSnapshot)

Data citation
Dataset: Trygve Bakken, Darren Bertagnolli, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Nick Dee, Rebecca Ferrer, Yuanyuan Fu, Aaron Garcia, Jessica Gloe, Jeff Goldy, Junitta Guzman, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Nelson Johansen, Danielle L. Jones, Kathryn Jordan, Matthew Jungert, Madhav Kannan, Inkar Kapen, Lauren Kruse, Changkye Lee, Boaz P. Levi, Rachel McCue, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Elliot Phillips, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Alex Tran, Jingyi Xie, Zizhen Yao, Dan Yuan, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-u7mdy48
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
CCBY4

Download URLs

  • Download BDBag https://data.nemoarchive.org/bdbags/BICAN/BICAN-2026-09-RR-SCO/col-u7mdy48__BICAN__MetaSnapshot__2026-09-25__HMBA__aibs__nuclei__10X_genomics_multiome__rhesus_macaque__demultiplexed_fastq__open__no_restriction.tgz 18,568 files 67,026.04 GB
    Raw BDBag

Anatomical Regions

  • ventral group of lateral nucleus
  • rostral subdivision of area 20
  • mediodorsal nucleus of thalamus
  • dorsal division of PCC (area 31)
  • lateroventral subdivision of area 8
  • laterodorsal subdivision of area 8

Taxa

rhesus macaque

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; chromatin multiome; transcriptome
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq 10X genomics multiome;rnaseq

Child collections

  • nemo:col-5tc62mf
    Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain - fastq (BICAN-2026-09-RR-SCO Snapshot ATAC)
  • nemo:col-v9m3yjw
    Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain - fastq (BICAN-2026-09-RR-SCO Snapshot RNA)

Parent collections

  • nemo:col-ddp8buz
    Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain (MetaCumulative)
    collection
  • nemo:col-i17zvqh
    BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-09-RR-SCO)
    collection

Associated publications

No publications linked yet.

URL Protocols

Contributors

No contributors listed for Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain - fastq (BICAN-2026-09-RR-SCO MetaSnapshot) collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources