NeMO Identifier: Collection

NeMO ID: nemo:dat-4j3fen2

  • Collection Name: Human Basal Ganglia Astrocyte Diversity Reflects Evolutionary and Circuit-Level Specialization
  • Short Name:
  • Programs: biccn , bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: human , rhesus macaque , house mouse
  • Assays: spatial transcriptome , multiome; chromatin , multiome; transcriptome
  • Anatomical Regions: basal ganglia
  • Modalities: multimodal
  • Techniques: 10X genomics multiome;atac-seq , 10X genomics multiome;rnaseq
  • Specimen Type:
  • Keywords: Basal Ganglia , Astrocyte heterogeneity , Regional specialization , Astrocyte-synapse interactions , Striatal astrocyte , multi-omics integrative analysis
  • Contact:
  • Grant Numbers: 1U01MH114812, UM1MH130981
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Data associated with this Publication

DOI Year PubMed ID Journal Vol:Page

Contributors

Name Organization ORCID
Trygve E Bakken Allen Institute 0000-0003-3373-7386
Joseph Ecker Salk Institute for Biological Studies 0000-0001-5799-5895
Ed S Lein Allen Institute 0000-0001-9012-6552
Bing Ren University of California, San Diego 0000-0002-5435-1127
Song-Lin Ding Allen Institute 0000-0002-7072-5272
Madeleine Hewitt Allen Institute for Brain Science 0000-0002-4387-327X
Nelson J Johansen Allen Institute for Brain Science 0000-0002-4436-969X
Yuanyuan Fu Allen Institute for Brain Science 0000-0001-5934-6573
Matthew Schmitz Allen Institute for Brain Science 0000-0002-6177-8161
Lei Chang University of California, San Deigo 0000-0002-2606-3347
Yang Xie University of California, San Deigo 0000-0002-7453-6786
Morgan Wirthlin
Meghan Turner
John Mich
Brian Long
Jennie Close
Inkar Kapen
Aaron D Garcia
Stephanie Seeman
Boaz P Levi
Rebecca D Hodge
Niklas Kempynck
Wubin Ding
Kai Li

Project(s) this Collection Belongs To

ID Title
nemo:grn-eg23ca0 A multimodal atlas of human brain cell types
nemo:prj-t8d9ty5 Functionally guided adult whole brain cell atlas in human and NHP

Brain Region(s) of Interest

Name
basal ganglia

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-n6b0x7w BICAN Basal Ganglia package collection BICAN Basal Ganglia package ongoing

Documentation