NeMO Identifier: Collection

NeMO ID: nemo:dat-67iym87

  • Collection Name: The transcriptomic and spatial organization of telencephalic GABAergic neuronal types: BICAN_Raw_10xv4
  • Short Name: van_Velthoven_Zeng_Mouse_Telencephalic_GABAergic_Neuronal_Types_scRNAseq_BICAN_Raw_10xv4
  • Programs: biccn , bican

COLLECTION METADATA

  • Description:
  • Collection Type: Dynamic
  • Taxa: house mouse
  • Assays:
  • Anatomical Regions:
  • Modalities:
  • Techniques:
  • Specimen Type:
  • Keywords: GABAergic , cell type , interneuron , single-cell RNA sequencing , single-cell transcriptomics , development
  • Contact: Cindy Van Velthoven
  • Grant Numbers: 1U19MH114830, U01MH130962
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open
  • Data License: CC BY 4.0

Contributors

Name Organization ORCID
Tim Dolbeare Allen Institute
Lauren Kruse Allen Institute
Bosiljka Tasic Allen Institute 0000-0002-6861-4506
Cindy Van Velthoven Allen Institute 0000-0001-5120-4546
Zizhen Yao Allen Institute 0000-0002-9361-5607
Hongkui Zeng Allen Institute 0000-0002-0326-5878
Changkyu Lee Allen Institute for Brain Science 0000-0001-6146-0404
Kimberly A Smith Allen Institute for Brain Science 0000-0002-3142-1970
Tamara Casper Allen Institute for Brain Science 0000-0003-1638-3651
Anish Bhaswanth Chakka Allen Institute for Brain Science 0000-0002-1095-1817
Rushil Chakrabarty Allen Institute for Brain Science 0000-0003-1722-8557
Nick Dee Allen Institute for Brain Science 0000-0002-2831-9254
Jessica Gloe Allen Institute for Brain Science 0000-0001-8343-3423
Jeff Goldy Allen Institute for Brain Science 0000-0001-5140-6922
Junitta Guzman Allen Institute for Brain Science 0000-0001-8217-9232
Windy Ho Allen Institute for Brain Science 0000-0001-6200-9906
Beagan Nguy Allen Institute for Brain Science 0000-0001-9577-5260
Chelsea M Pagan Allen Institute for Brain Science 0000-0002-3932-9992
Trangthanh Pham Allen Institute for Brain Science 0000-0002-4738-5062
Amy Torkelson Allen Institute for Brain Science 0000-0002-9465-4202
Emma D Thomas Allen Institute for Brain Science
Michael Clark Allen Institute for Brain Science
Rebecca Ferrer Allen Institute for Brain Science
Yuan Gao Allen Institute for Brain Science
Katelyn James Allen Institute for Brain Science
Scott Daniel
Jack Waters
Delissa McMillen
Lydia Ng
Kara Ronellenfitch
Carliana Halterman
Mike J Huang
Michael Kunst

Project(s) this Collection Belongs To

ID Title
nemo:grn-eyks011 A comprehensive whole-brain atlas of cell types in the mouse
nemo:prj-ggc1k9k Comprehensive single-cell atlas of the developing mouse brain

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:dat-zqurqvh The transcriptomic and spatial organization of telencephalic GABAergic neuronal types files

Documentation

PLEASE CITE NeMO DATA AS FOLLOWS:

Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 Jan 6;51(D1):D1075-D1085. doi: 10.1093/nar/gkac962. PMID: 36318260; PMCID: PMC9825473