NeMO Identifier: Collection

NeMO ID: nemo:col-pdu6wff

  • Collection Name: Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1) - Arlotta Lab (BICAN-2026-01-RR-SCO Snapshot)
  • Short Name: arlotta_10Xv3.1_mouse_cells (BICAN-2026-01-RR-SCO Snapshot)
  • Programs: bican

COLLECTION METADATA

  • Description:
  • Collection Type: Static
  • Taxa: house mouse
  • Assays: transcriptome
  • Anatomical Regions: Hindbrain , Hippocampal formation , Cerebral nuclei , Olfactory areas , Isocortex , Cerebellum , Midbrain , Brain stem , Interbrain , Cortical subplate , Cerebrum
  • Modalities: transcriptome
  • Techniques: 10x chromium 3' v3.1 sequencing
  • Specimen Type: cells
  • Keywords: BICAN , Rapid Release , 2026
  • Contact:
  • Grant Numbers: U01MH130962
  • Funding Agency: NIMH
  • URL Protocol:
  • Data Access: open

Project(s) this Collection Belongs To

ID Title
nemo:prj-ggc1k9k Comprehensive single-cell atlas of the developing mouse brain

Brain Region(s) of Interest

Name
Hindbrain
Hippocampal formation
Cerebral nuclei
Olfactory areas
Isocortex
Cerebellum
Midbrain
Brain stem
Interbrain
Cortical subplate
Cerebrum

Parent Collections

Collection ID Name Type Short Name Submission Status
nemo:col-77n6hha Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1) - Arlotta Lab (Cumulative) collection arlotta_10Xv3.1_mouse_cells (Cumulative)
nemo:col-ow59b0f BICAN Rapid Release Inventory: Single cell transcriptomics and epigenomics (BICAN-2026-01-RR-SCO) collection BICAN-2026-01-RR-SCO

Documentation


Data Citation:

Dataset: Juliana Brown, Daniela Di Bella, Nalini Oliver, Ashwin Shetty, Vaishnavi Venkat, Paola Arlotta (2026) Developing Mouse Brain Atlas: RNAseq of single cells from embryonic and postnatal mouse brain (10X v3.1) - Arlotta Lab [Dataset]. Available from: https://assets.nemoarchive.org/nemo:col-pdu6wff