BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__rhesus_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction

Program
bican
Collection Type
Static

This is a MetaSnapshot collection for the 10X_genomics_multiome technique with criteria: HMBA__aibs__nuclei__10X_genomics_multiome__rhesus_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction.

Data citation
Dataset: Trygve Bakken, Darren Bertagnolli, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Michael Clark, Nick Dee, Rebecca Ferrer, Yuanyuan Fu, Aaron Garcia, Jessica Gloe, Jeff Goldy, Junitta Guzman, Daniel Hirschstein, Windy Ho, Rebecca Hodge, Katelyn James, Nelson Johansen, Danielle L. Jones, Kathryn Jordan, Matthew Jungert, Madhav Kannan, Inkar Kapen, Lauren Kruse, Changkyu Lee, Boaz P. Levi, Rachel McCue, Beagan Nguy, Nicholas Peña, Trangthanh Pham, Elliot Phillips, Nadiya V. Shapovalova, Kimberly A. Smith, Cassandra Sobieski, Michael Tieu, Amy Torkelson, Alex Tran, Jingyi Xie, Zizhen Yao, Dan Yuan, Hongkui Zeng, Ed Lein (2024) Human and Mammalian Brain Atlas: Multiome analysis of single nuclei from rhesus macaque brain [Dataset]. Available from: https://assets.nemoarchive.org/col-ynb19oi.
Funding agency
NIMH
Grant numbers
UM1MH130981
Access
open
License
No license listed

Download URLs

No download URLs listed for this collection.

Anatomical Regions

  • ventral group of lateral nucleus
  • caudate nucleus
  • mediodorsal nucleus of thalamus
  • septal nuclei
  • islands of Calleja
  • lateral nuclear complex of thalamus

Taxa

rhesus macaque

Projects this collection belongs to

  • nemo:prj-t8d9ty5
    Functionally guided adult whole brain cell atlas in human and NHP

Assays, Modalities & Techniques

Assays
multiome; chromatin multiome; transcriptome
Modalities
multimodal
Techniques
10X genomics multiome;atac-seq 10X genomics multiome;rnaseq

Child collections

  • nemo:col-t73ddet
    BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_ATACseq__rhesus_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction
  • nemo:col-rpsij5k
    BICAN__Snapshot__2025-08-12__HMBA__aibs__nuclei__10xMultiome_RNAseq__rhesus_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction

Parent collections

  • nemo:col-dgu8s60
    BICAN__MetaCumulative__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__rhesus_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction
    collection
  • nemo:col-gnbwm7e
    BICAN-2025-09-RR-SCO
    collection

Associated publications

No publications linked yet.

URL Protocols

No protocol URLs listed for this collection.

Contributors

No contributors listed for BICAN__MetaSnapshot__2025-08-12__HMBA__aibs__nuclei__10X_genomics_multiome__rhesus_macaque__demultiplexed_fastq__coh-8boto7m__no_restriction collection.

Cross-archive links

No cross-archive links listed for this collection.

Documentation & resources